BCAT2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BCAT2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BCAT2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BCAT2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BCAT2 Up.

Results found

Linked to

	Label	Description
	ARPC1A Gene (Entity type)	ENSG00000241685 - actin related protein 2/3 complex subunit 1A
	ECH1 Gene (Entity type)	ENSG00000104823 - enoyl-CoA hydratase 1
	NAE1 Gene (Entity type)	ENSG00000159593 - NEDD8 activating enzyme E1 subunit 1
	GOLPH3L Gene (Entity type)	ENSG00000143457 - golgi phosphoprotein 3 like
	RBL1 Gene (Entity type)	ENSG00000080839 - RB transcriptional corepressor like 1
	SNTB2 Gene (Entity type)	ENSG00000168807 - syntrophin beta 2
	MFNG Gene (Entity type)	ENSG00000100060 - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
	WWOX Gene (Entity type)	ENSG00000186153 - WW domain containing oxidoreductase
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2

ARPC1A

Gene (Entity type)

ENSG00000241685 - actin related protein 2/3 complex subunit 1A

ECH1

Gene (Entity type)

ENSG00000104823 - enoyl-CoA hydratase 1

NAE1

Gene (Entity type)

ENSG00000159593 - NEDD8 activating enzyme E1 subunit 1

GOLPH3L

Gene (Entity type)

ENSG00000143457 - golgi phosphoprotein 3 like

RBL1

Gene (Entity type)

ENSG00000080839 - RB transcriptional corepressor like 1

SNTB2

Gene (Entity type)

ENSG00000168807 - syntrophin beta 2

MFNG

Gene (Entity type)

ENSG00000100060 - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

WWOX

Gene (Entity type)

ENSG00000186153 - WW domain containing oxidoreductase

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.