TRIM24 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TRIM24 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TRIM24 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TRIM24 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TRIM24 Up.

Results found

Linked to

	Label	Description
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	IL1RL1 Gene (Entity type)	ENSG00000115602 - interleukin 1 receptor like 1
	PTBP2 Gene (Entity type)	ENSG00000117569 - polypyrimidine tract binding protein 2
	COX7A2 Gene (Entity type)	ENSG00000112695 - cytochrome c oxidase subunit 7A2
	RAB11A Gene (Entity type)	ENSG00000103769 - RAB11A, member RAS oncogene family
	PANK2 Gene (Entity type)	ENSG00000125779 - pantothenate kinase 2
	SEC23B Gene (Entity type)	ENSG00000101310 - SEC23 homolog B, COPII component
	IFT20 Gene (Entity type)	ENSG00000109083 - intraflagellar transport 20
	NDUFV2 Gene (Entity type)	ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

IL1RL1

Gene (Entity type)

ENSG00000115602 - interleukin 1 receptor like 1

PTBP2

Gene (Entity type)

ENSG00000117569 - polypyrimidine tract binding protein 2

COX7A2

Gene (Entity type)

ENSG00000112695 - cytochrome c oxidase subunit 7A2

RAB11A

Gene (Entity type)

ENSG00000103769 - RAB11A, member RAS oncogene family

PANK2

Gene (Entity type)

ENSG00000125779 - pantothenate kinase 2

SEC23B

Gene (Entity type)

ENSG00000101310 - SEC23 homolog B, COPII component

IFT20

Gene (Entity type)

ENSG00000109083 - intraflagellar transport 20

NDUFV2

Gene (Entity type)

ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.