NPHP4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with NPHP4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with NPHP4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with NPHP4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with NPHP4 Up.

Results found

Linked to

	Label	Description
	GGNBP2 Gene (Entity type)	ENSG00000278311 - gametogenetin binding protein 2
	NAA40 Gene (Entity type)	ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit
	RUFY2 Gene (Entity type)	ENSG00000204130 - RUN and FYVE domain containing 2
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	NCK2 Gene (Entity type)	ENSG00000071051 - NCK adaptor protein 2
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	HMBOX1 Gene (Entity type)	ENSG00000147421 - homeobox containing 1
	PRRC2C Gene (Entity type)	ENSG00000117523 - proline rich coiled-coil 2C
	CEP350 Gene (Entity type)	ENSG00000135837 - centrosomal protein 350
	LCAT Gene (Entity type)	ENSG00000213398 - lecithin-cholesterol acyltransferase

GGNBP2

Gene (Entity type)

ENSG00000278311 - gametogenetin binding protein 2

NAA40

Gene (Entity type)

ENSG00000110583 - N-alpha-acetyltransferase 40, NatD catalytic subunit

RUFY2

Gene (Entity type)

ENSG00000204130 - RUN and FYVE domain containing 2

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

NCK2

Gene (Entity type)

ENSG00000071051 - NCK adaptor protein 2

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

HMBOX1

Gene (Entity type)

ENSG00000147421 - homeobox containing 1

PRRC2C

Gene (Entity type)

ENSG00000117523 - proline rich coiled-coil 2C

CEP350

Gene (Entity type)

ENSG00000135837 - centrosomal protein 350

LCAT

Gene (Entity type)

ENSG00000213398 - lecithin-cholesterol acyltransferase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.