VNN2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with VNN2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with VNN2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with VNN2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with VNN2 Up.

Results found

Linked to

	Label	Description
	MRPS18B Gene (Entity type)	ENSG00000204568 - mitochondrial ribosomal protein S18B
	GIMAP5 Gene (Entity type)	ENSG00000196329 - GTPase, IMAP family member 5
	GEMIN2 Gene (Entity type)	ENSG00000092208 - gem nuclear organelle associated protein 2
	DCTN3 Gene (Entity type)	ENSG00000137100 - dynactin subunit 3
	MRPL42 Gene (Entity type)	ENSG00000198015 - mitochondrial ribosomal protein L42
	PSMA2 Gene (Entity type)	ENSG00000106588 - proteasome 20S subunit alpha 2
	MRPL48 Gene (Entity type)	ENSG00000175581 - mitochondrial ribosomal protein L48
	ATG5 Gene (Entity type)	ENSG00000057663 - autophagy related 5
	MRPS28 Gene (Entity type)	ENSG00000147586 - mitochondrial ribosomal protein S28
	PRKAG1 Gene (Entity type)	ENSG00000181929 - protein kinase AMP-activated non-catalytic subunit gamma 1

MRPS18B

Gene (Entity type)

ENSG00000204568 - mitochondrial ribosomal protein S18B

GIMAP5

Gene (Entity type)

ENSG00000196329 - GTPase, IMAP family member 5

GEMIN2

Gene (Entity type)

ENSG00000092208 - gem nuclear organelle associated protein 2

DCTN3

Gene (Entity type)

ENSG00000137100 - dynactin subunit 3

MRPL42

Gene (Entity type)

ENSG00000198015 - mitochondrial ribosomal protein L42

PSMA2

Gene (Entity type)

ENSG00000106588 - proteasome 20S subunit alpha 2

MRPL48

Gene (Entity type)

ENSG00000175581 - mitochondrial ribosomal protein L48

ATG5

Gene (Entity type)

ENSG00000057663 - autophagy related 5

MRPS28

Gene (Entity type)

ENSG00000147586 - mitochondrial ribosomal protein S28

PRKAG1

Gene (Entity type)

ENSG00000181929 - protein kinase AMP-activated non-catalytic subunit gamma 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.