VNN2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with VNN2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with VNN2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with VNN2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with VNN2 Up.

Results found

Linked to

	Label	Description
	POLA2 Gene (Entity type)	ENSG00000014138 - DNA polymerase alpha 2, accessory subunit
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	MIF Gene (Entity type)	ENSG00000240972 - macrophage migration inhibitory factor
	EIF3I Gene (Entity type)	ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	ATP5MC1 Gene (Entity type)	ENSG00000159199 - ATP synthase membrane subunit c locus 1
	PSMA3 Gene (Entity type)	ENSG00000100567 - proteasome 20S subunit alpha 3
	B3GALNT1 Gene (Entity type)	ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)
	VKORC1 Gene (Entity type)	ENSG00000167397 - vitamin K epoxide reductase complex subunit 1
	PSMA2 Gene (Entity type)	ENSG00000106588 - proteasome 20S subunit alpha 2

POLA2

Gene (Entity type)

ENSG00000014138 - DNA polymerase alpha 2, accessory subunit

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

MIF

Gene (Entity type)

ENSG00000240972 - macrophage migration inhibitory factor

EIF3I

Gene (Entity type)

ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

ATP5MC1

Gene (Entity type)

ENSG00000159199 - ATP synthase membrane subunit c locus 1

PSMA3

Gene (Entity type)

ENSG00000100567 - proteasome 20S subunit alpha 3

B3GALNT1

Gene (Entity type)

ENSG00000169255 - beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)

VKORC1

Gene (Entity type)

ENSG00000167397 - vitamin K epoxide reductase complex subunit 1

PSMA2

Gene (Entity type)

ENSG00000106588 - proteasome 20S subunit alpha 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.