GSE168101 BRD4 knockout KBM-7 SLC Nucleoside Transport Proteins 2 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE168101_BRD4 knockout_KBM-7_SLC_Nucleoside Transport Proteins_2_v_3_human_up.

Results found

Linked to

	Label	Description
	FAM30A Gene (Entity type)	ENSG00000226777 - family with sequence similarity 30 member A
	RPS18 Gene (Entity type)	ENSG00000231500 - ribosomal protein S18
	GAS5 Gene (Entity type)	ENSG00000234741 - growth arrest specific 5
	SNHG29 Gene (Entity type)	ENSG00000175061 - small nucleolar RNA host gene 29
	SNHG5 Gene (Entity type)	ENSG00000203875 - small nucleolar RNA host gene 5
	ZFAS1 Gene (Entity type)	ENSG00000177410 - ZNFX1 antisense RNA 1
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	MTCO2P12 Gene (Entity type)	ENSG00000229344 - MT-CO2 pseudogene 12
	SNHG7 Gene (Entity type)	ENSG00000233016 - small nucleolar RNA host gene 7
	MALAT1 Gene (Entity type)	ENSG00000251562 - metastasis associated lung adenocarcinoma transcript 1

FAM30A

Gene (Entity type)

ENSG00000226777 - family with sequence similarity 30 member A

RPS18

Gene (Entity type)

ENSG00000231500 - ribosomal protein S18

GAS5

Gene (Entity type)

ENSG00000234741 - growth arrest specific 5

SNHG29

Gene (Entity type)

ENSG00000175061 - small nucleolar RNA host gene 29

SNHG5

Gene (Entity type)

ENSG00000203875 - small nucleolar RNA host gene 5

ZFAS1

Gene (Entity type)

ENSG00000177410 - ZNFX1 antisense RNA 1

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

MTCO2P12

Gene (Entity type)

ENSG00000229344 - MT-CO2 pseudogene 12

SNHG7

Gene (Entity type)

ENSG00000233016 - small nucleolar RNA host gene 7

MALAT1

Gene (Entity type)

ENSG00000251562 - metastasis associated lung adenocarcinoma transcript 1

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.