GSE222676 ABCA1 knockout IMR-90 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE222676_ABCA1 knockout_IMR-90_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE222676_ABCA1 knockout_IMR-90_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE222676_ABCA1 knockout_IMR-90_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE222676_ABCA1 knockout_IMR-90_1_v_0_human_up.

Results found

Linked to

	Label	Description
	H4C15 Gene (Entity type)	H4 clustered histone 15
	H2AC19 Gene (Entity type)	H2A clustered histone 19
	PVT1 Gene (Entity type)	Pvt1 oncogene
	BAIAP2-DT Gene (Entity type)	BAIAP2 divergent transcript
	PURPL Gene (Entity type)	p53 upregulated regulator of p53 levels
	ATP6V1G2 Gene (Entity type)	ATPase H+ transporting V1 subunit G2
	CENPBD2P Gene (Entity type)	CENPB DNA-binding domains containing 2, pseudogene
	H2BC20P Gene (Entity type)	H2B clustered histone 20, pseudogene
	H3C10 Gene (Entity type)	H3 clustered histone 10
	TMEM198B Gene (Entity type)	transmembrane protein 198B (pseudogene)

H4C15

Gene (Entity type)

H4 clustered histone 15

H2AC19

Gene (Entity type)

H2A clustered histone 19

PVT1

Gene (Entity type)

Pvt1 oncogene

BAIAP2-DT

Gene (Entity type)

BAIAP2 divergent transcript

PURPL

Gene (Entity type)

p53 upregulated regulator of p53 levels

ATP6V1G2

Gene (Entity type)

ATPase H+ transporting V1 subunit G2

CENPBD2P

Gene (Entity type)

CENPB DNA-binding domains containing 2, pseudogene

H2BC20P

Gene (Entity type)

H2B clustered histone 20, pseudogene

H3C10

Gene (Entity type)

H3 clustered histone 10

TMEM198B

Gene (Entity type)

transmembrane protein 198B (pseudogene)

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.