INPP5D Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with INPP5D Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with INPP5D Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with INPP5D Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with INPP5D Up.

Results found

Linked to

	Label	Description
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	EIF3I Gene (Entity type)	ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I
	TRAK2 Gene (Entity type)	ENSG00000115993 - trafficking kinesin protein 2
	RPL29 Gene (Entity type)	ENSG00000162244 - ribosomal protein L29
	CR2 Gene (Entity type)	ENSG00000117322 - complement C3d receptor 2
	LSM4 Gene (Entity type)	ENSG00000130520 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
	TSPOAP1 Gene (Entity type)	ENSG00000005379 - TSPO associated protein 1
	PSMB4 Gene (Entity type)	ENSG00000159377 - proteasome 20S subunit beta 4

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

EIF3I

Gene (Entity type)

ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I

TRAK2

Gene (Entity type)

ENSG00000115993 - trafficking kinesin protein 2

RPL29

Gene (Entity type)

ENSG00000162244 - ribosomal protein L29

CR2

Gene (Entity type)

ENSG00000117322 - complement C3d receptor 2

LSM4

Gene (Entity type)

ENSG00000130520 - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated

TSPOAP1

Gene (Entity type)

ENSG00000005379 - TSPO associated protein 1

PSMB4

Gene (Entity type)

ENSG00000159377 - proteasome 20S subunit beta 4

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.