GSE85880 GSE85881 tretinoin cardiac muscle cell 4 v 2 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_4_v_2_human_up.

Results found

Linked to

	Label	Description
	FANCL Gene (Entity type)	ENSG00000115392 - FA complementation group L
	WASF3 Gene (Entity type)	ENSG00000132970 - WASP family member 3
	TRERF1 Gene (Entity type)	ENSG00000124496 - transcriptional regulating factor 1
	INCENP Gene (Entity type)	ENSG00000149503 - inner centromere protein
	SF3A2 Gene (Entity type)	ENSG00000104897 - splicing factor 3a subunit 2
	PTPRS Gene (Entity type)	ENSG00000105426 - protein tyrosine phosphatase receptor type S
	BMERB1 Gene (Entity type)	ENSG00000166780 - bMERB domain containing 1
	CORO2B Gene (Entity type)	ENSG00000103647 - coronin 2B
	CENPV Gene (Entity type)	ENSG00000166582 - centromere protein V
	THSD4 Gene (Entity type)	ENSG00000187720 - thrombospondin type 1 domain containing 4

FANCL

Gene (Entity type)

ENSG00000115392 - FA complementation group L

WASF3

Gene (Entity type)

ENSG00000132970 - WASP family member 3

TRERF1

Gene (Entity type)

ENSG00000124496 - transcriptional regulating factor 1

INCENP

Gene (Entity type)

ENSG00000149503 - inner centromere protein

SF3A2

Gene (Entity type)

ENSG00000104897 - splicing factor 3a subunit 2

PTPRS

Gene (Entity type)

ENSG00000105426 - protein tyrosine phosphatase receptor type S

BMERB1

Gene (Entity type)

ENSG00000166780 - bMERB domain containing 1

CORO2B

Gene (Entity type)

ENSG00000103647 - coronin 2B

CENPV

Gene (Entity type)

ENSG00000166582 - centromere protein V

THSD4

Gene (Entity type)

ENSG00000187720 - thrombospondin type 1 domain containing 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.