BSG Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BSG Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BSG Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BSG Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BSG Up.

Results found

Linked to

	Label	Description
	ADCY3 Gene (Entity type)	ENSG00000138031 - adenylate cyclase 3
	PRKAR2A Gene (Entity type)	ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	CAD Gene (Entity type)	ENSG00000084774 - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
	EIF3I Gene (Entity type)	ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I
	IVL Gene (Entity type)	ENSG00000163207 - involucrin
	PPP1CA Gene (Entity type)	ENSG00000172531 - protein phosphatase 1 catalytic subunit alpha
	SERF2 Gene (Entity type)	ENSG00000140264 - small EDRK-rich factor 2
	ALPL Gene (Entity type)	ENSG00000162551 - alkaline phosphatase, biomineralization associated
	PHACTR4 Gene (Entity type)	ENSG00000204138 - phosphatase and actin regulator 4

ADCY3

Gene (Entity type)

ENSG00000138031 - adenylate cyclase 3

PRKAR2A

Gene (Entity type)

ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

CAD

Gene (Entity type)

ENSG00000084774 - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

EIF3I

Gene (Entity type)

ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I

IVL

Gene (Entity type)

ENSG00000163207 - involucrin

PPP1CA

Gene (Entity type)

ENSG00000172531 - protein phosphatase 1 catalytic subunit alpha

SERF2

Gene (Entity type)

ENSG00000140264 - small EDRK-rich factor 2

ALPL

Gene (Entity type)

ENSG00000162551 - alkaline phosphatase, biomineralization associated

PHACTR4

Gene (Entity type)

ENSG00000204138 - phosphatase and actin regulator 4

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.