CROT Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CROT Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CROT Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CROT Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CROT Up.

Results found

Linked to

	Label	Description
	IFT25 Gene (Entity type)	ENSG00000081870 - intraflagellar transport 25
	TMEM254 Gene (Entity type)	ENSG00000133678 - transmembrane protein 254
	SAXO6 Gene (Entity type)	ENSG00000111554 - stabilizer of axonemal microtubules 6
	RAB33A Gene (Entity type)	ENSG00000134594 - RAB33A, member RAS oncogene family
	BTBD1 Gene (Entity type)	ENSG00000064726 - BTB domain containing 1
	CSPP1 Gene (Entity type)	ENSG00000104218 - centrosome and spindle pole associated protein 1
	ATP5PF Gene (Entity type)	ENSG00000154723 - ATP synthase peripheral stalk subunit F6
	HINT1 Gene (Entity type)	ENSG00000169567 - histidine triad nucleotide binding protein 1
	PMS1 Gene (Entity type)	ENSG00000064933 - PMS1 homolog 1, mismatch repair system component
	ARMC1 Gene (Entity type)	ENSG00000104442 - armadillo repeat containing 1

IFT25

Gene (Entity type)

ENSG00000081870 - intraflagellar transport 25

TMEM254

Gene (Entity type)

ENSG00000133678 - transmembrane protein 254

SAXO6

Gene (Entity type)

ENSG00000111554 - stabilizer of axonemal microtubules 6

RAB33A

Gene (Entity type)

ENSG00000134594 - RAB33A, member RAS oncogene family

BTBD1

Gene (Entity type)

ENSG00000064726 - BTB domain containing 1

CSPP1

Gene (Entity type)

ENSG00000104218 - centrosome and spindle pole associated protein 1

ATP5PF

Gene (Entity type)

ENSG00000154723 - ATP synthase peripheral stalk subunit F6

HINT1

Gene (Entity type)

ENSG00000169567 - histidine triad nucleotide binding protein 1

PMS1

Gene (Entity type)

ENSG00000064933 - PMS1 homolog 1, mismatch repair system component

ARMC1

Gene (Entity type)

ENSG00000104442 - armadillo repeat containing 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.