CROT Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CROT Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CROT Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CROT Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CROT Up.

Results found

Linked to

	Label	Description
	CMPK1 Gene (Entity type)	ENSG00000162368 - cytidine/uridine monophosphate kinase 1
	AGL Gene (Entity type)	ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	UQCR11 Gene (Entity type)	ENSG00000127540 - ubiquinol-cytochrome c reductase, complex III subunit XI
	HINT1 Gene (Entity type)	ENSG00000169567 - histidine triad nucleotide binding protein 1
	IFT25 Gene (Entity type)	ENSG00000081870 - intraflagellar transport 25
	MRPL57 Gene (Entity type)	ENSG00000173141 - mitochondrial ribosomal protein L57
	SP3 Gene (Entity type)	ENSG00000172845 - Sp3 transcription factor
	PLA2G12A Gene (Entity type)	ENSG00000123739 - phospholipase A2 group XIIA
	RAB33A Gene (Entity type)	ENSG00000134594 - RAB33A, member RAS oncogene family

CMPK1

Gene (Entity type)

ENSG00000162368 - cytidine/uridine monophosphate kinase 1

AGL

Gene (Entity type)

ENSG00000162688 - amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

UQCR11

Gene (Entity type)

ENSG00000127540 - ubiquinol-cytochrome c reductase, complex III subunit XI

HINT1

Gene (Entity type)

ENSG00000169567 - histidine triad nucleotide binding protein 1

IFT25

Gene (Entity type)

ENSG00000081870 - intraflagellar transport 25

MRPL57

Gene (Entity type)

ENSG00000173141 - mitochondrial ribosomal protein L57

SP3

Gene (Entity type)

ENSG00000172845 - Sp3 transcription factor

PLA2G12A

Gene (Entity type)

ENSG00000123739 - phospholipase A2 group XIIA

RAB33A

Gene (Entity type)

ENSG00000134594 - RAB33A, member RAS oncogene family

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.