GSE139685 MI-2 1 v 3 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139685_MI-2_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139685_MI-2_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139685_MI-2_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139685_MI-2_1_v_3_human_up.

Results found

Linked to

	Label	Description
	SYNRG Gene (Entity type)	synergin gamma
	GTF2IP4 Gene (Entity type)	general transcription factor IIi pseudogene 4
	CASTOR3P Gene (Entity type)	CASTOR family member 3, pseudogene
	UCA1 Gene (Entity type)	urothelial cancer associated 1
	SYT15B Gene (Entity type)	synaptotagmin 15B
	H3C6 Gene (Entity type)	H3 clustered histone 6
	TGILR Gene (Entity type)	TGF-beta induced TARBP2 interacting lncRNA
	GTF2IP1 Gene (Entity type)	general transcription factor IIi pseudogene 1
	HOXA-AS3 Gene (Entity type)	HOXA cluster antisense RNA 3
	TSPEAR-AS1 Gene (Entity type)	TSPEAR antisense RNA 1

SYNRG

Gene (Entity type)

synergin gamma

GTF2IP4

Gene (Entity type)

general transcription factor IIi pseudogene 4

CASTOR3P

Gene (Entity type)

CASTOR family member 3, pseudogene

UCA1

Gene (Entity type)

urothelial cancer associated 1

SYT15B

Gene (Entity type)

synaptotagmin 15B

H3C6

Gene (Entity type)

H3 clustered histone 6

TGILR

Gene (Entity type)

TGF-beta induced TARBP2 interacting lncRNA

GTF2IP1

Gene (Entity type)

general transcription factor IIi pseudogene 1

HOXA-AS3

Gene (Entity type)

HOXA cluster antisense RNA 3

TSPEAR-AS1

Gene (Entity type)

TSPEAR antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.