GSE163110 SKP2 knockdown 0 v 2 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE163110_SKP2 knockdown_0_v_2_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE163110_SKP2 knockdown_0_v_2_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE163110_SKP2 knockdown_0_v_2_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE163110_SKP2 knockdown_0_v_2_human_dn.

Results found

Linked to

	Label	Description
	POLA2 Gene (Entity type)	ENSG00000014138 - DNA polymerase alpha 2, accessory subunit
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3
	PPP1CC Gene (Entity type)	ENSG00000186298 - protein phosphatase 1 catalytic subunit gamma
	CHAF1B Gene (Entity type)	ENSG00000159259 - chromatin assembly factor 1 subunit B
	PIP5K1A Gene (Entity type)	ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
	TDG Gene (Entity type)	ENSG00000139372 - thymine DNA glycosylase
	PLK4 Gene (Entity type)	ENSG00000142731 - polo like kinase 4
	BLMH Gene (Entity type)	ENSG00000108578 - bleomycin hydrolase
	PRKAR2A Gene (Entity type)	ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1

POLA2

Gene (Entity type)

ENSG00000014138 - DNA polymerase alpha 2, accessory subunit

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

PPP1CC

Gene (Entity type)

ENSG00000186298 - protein phosphatase 1 catalytic subunit gamma

CHAF1B

Gene (Entity type)

ENSG00000159259 - chromatin assembly factor 1 subunit B

PIP5K1A

Gene (Entity type)

ENSG00000143398 - phosphatidylinositol-4-phosphate 5-kinase type 1 alpha

TDG

Gene (Entity type)

ENSG00000139372 - thymine DNA glycosylase

PLK4

Gene (Entity type)

ENSG00000142731 - polo like kinase 4

BLMH

Gene (Entity type)

ENSG00000108578 - bleomycin hydrolase

PRKAR2A

Gene (Entity type)

ENSG00000114302 - protein kinase cAMP-dependent type II regulatory subunit alpha

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.