C9 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with C9 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with C9 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with C9 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with C9 Down.

Results found

Linked to

	Label	Description
	MAD1L1 Gene (Entity type)	ENSG00000002822 - mitotic arrest deficient 1 like 1
	HPGDS Gene (Entity type)	ENSG00000163106 - hematopoietic prostaglandin D synthase
	TNFAIP1 Gene (Entity type)	ENSG00000109079 - TNF alpha induced protein 1
	TRAPPC6A Gene (Entity type)	ENSG00000007255 - trafficking protein particle complex subunit 6A
	TFCP2L1 Gene (Entity type)	ENSG00000115112 - transcription factor CP2 like 1
	CD7 Gene (Entity type)	ENSG00000173762 - CD7 molecule
	ARPC4 Gene (Entity type)	ENSG00000241553 - actin related protein 2/3 complex subunit 4
	RAP1GDS1 Gene (Entity type)	ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1
	ACAN Gene (Entity type)	ENSG00000157766 - aggrecan
	PTPN7 Gene (Entity type)	ENSG00000143851 - protein tyrosine phosphatase non-receptor type 7

MAD1L1

Gene (Entity type)

ENSG00000002822 - mitotic arrest deficient 1 like 1

HPGDS

Gene (Entity type)

ENSG00000163106 - hematopoietic prostaglandin D synthase

TNFAIP1

Gene (Entity type)

ENSG00000109079 - TNF alpha induced protein 1

TRAPPC6A

Gene (Entity type)

ENSG00000007255 - trafficking protein particle complex subunit 6A

TFCP2L1

Gene (Entity type)

ENSG00000115112 - transcription factor CP2 like 1

CD7

Gene (Entity type)

ENSG00000173762 - CD7 molecule

ARPC4

Gene (Entity type)

ENSG00000241553 - actin related protein 2/3 complex subunit 4

RAP1GDS1

Gene (Entity type)

ENSG00000138698 - Rap1 GTPase-GDP dissociation stimulator 1

ACAN

Gene (Entity type)

ENSG00000157766 - aggrecan

PTPN7

Gene (Entity type)

ENSG00000143851 - protein tyrosine phosphatase non-receptor type 7

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.