GSE85880 GSE85881 tretinoin cardiac muscle cell 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	CYTOR Gene (Entity type)	cytoskeleton regulator RNA
	LOC389906 Gene (Entity type)	zinc finger protein 839 pseudogene
	TGILR Gene (Entity type)	TGF-beta induced TARBP2 interacting lncRNA
	STAG3L5P Gene (Entity type)	STAG3 cohesin complex component like 5, pseudogene
	LINC01806 Gene (Entity type)	long intergenic non-protein coding RNA 1806
	BISPR Gene (Entity type)	BST2 interferon stimulated positive regulator
	LINC00261 Gene (Entity type)	long intergenic non-protein coding RNA 261
	PDCD6IP-DT Gene (Entity type)	PDCD6IP divergent transcript
	KDM7A-DT Gene (Entity type)	KDM7A divergent transcript
	LOC729732 Gene (Entity type)	uncharacterized LOC729732

CYTOR

Gene (Entity type)

cytoskeleton regulator RNA

LOC389906

Gene (Entity type)

zinc finger protein 839 pseudogene

TGILR

Gene (Entity type)

TGF-beta induced TARBP2 interacting lncRNA

STAG3L5P

Gene (Entity type)

STAG3 cohesin complex component like 5, pseudogene

LINC01806

Gene (Entity type)

long intergenic non-protein coding RNA 1806

BISPR

Gene (Entity type)

BST2 interferon stimulated positive regulator

LINC00261

Gene (Entity type)

long intergenic non-protein coding RNA 261

PDCD6IP-DT

Gene (Entity type)

PDCD6IP divergent transcript

KDM7A-DT

Gene (Entity type)

KDM7A divergent transcript

LOC729732

Gene (Entity type)

uncharacterized LOC729732

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.