SVEP1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SVEP1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SVEP1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SVEP1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SVEP1 Up.

Results found

Linked to

	Label	Description
	PRR4 Gene (Entity type)	ENSG00000111215 - proline rich 4
	ZNF593 Gene (Entity type)	ENSG00000142684 - zinc finger protein 593
	RAB33A Gene (Entity type)	ENSG00000134594 - RAB33A, member RAS oncogene family
	TJP3 Gene (Entity type)	ENSG00000105289 - tight junction protein 3
	RLN2 Gene (Entity type)	ENSG00000107014 - relaxin 2
	CLDN5 Gene (Entity type)	ENSG00000184113 - claudin 5
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated
	ELOB Gene (Entity type)	ENSG00000103363 - elongin B
	FXN Gene (Entity type)	ENSG00000165060 - frataxin
	LIAS Gene (Entity type)	ENSG00000121897 - lipoic acid synthetase

PRR4

Gene (Entity type)

ENSG00000111215 - proline rich 4

ZNF593

Gene (Entity type)

ENSG00000142684 - zinc finger protein 593

RAB33A

Gene (Entity type)

ENSG00000134594 - RAB33A, member RAS oncogene family

TJP3

Gene (Entity type)

ENSG00000105289 - tight junction protein 3

RLN2

Gene (Entity type)

ENSG00000107014 - relaxin 2

CLDN5

Gene (Entity type)

ENSG00000184113 - claudin 5

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

ELOB

Gene (Entity type)

ENSG00000103363 - elongin B

FXN

Gene (Entity type)

ENSG00000165060 - frataxin

LIAS

Gene (Entity type)

ENSG00000121897 - lipoic acid synthetase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.