TREML4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TREML4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TREML4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TREML4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TREML4 Up.

Results found

Linked to

	Label	Description
	VRK3 Gene (Entity type)	ENSG00000105053 - VRK serine/threonine kinase 3
	FCN3 Gene (Entity type)	ENSG00000142748 - ficolin 3
	HPGDS Gene (Entity type)	ENSG00000163106 - hematopoietic prostaglandin D synthase
	TMEM160 Gene (Entity type)	ENSG00000130748 - transmembrane protein 160
	COX6B1 Gene (Entity type)	ENSG00000126267 - cytochrome c oxidase subunit 6B1
	DYNLRB1 Gene (Entity type)	ENSG00000125971 - dynein light chain roadblock-type 1
	BANF1 Gene (Entity type)	ENSG00000175334 - barrier to autointegration nuclear assembly factor 1
	MAP2K5 Gene (Entity type)	ENSG00000137764 - mitogen-activated protein kinase kinase 5
	BABAM2 Gene (Entity type)	ENSG00000158019 - BRISC and BRCA1 A complex member 2
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

VRK3

Gene (Entity type)

ENSG00000105053 - VRK serine/threonine kinase 3

FCN3

Gene (Entity type)

ENSG00000142748 - ficolin 3

HPGDS

Gene (Entity type)

ENSG00000163106 - hematopoietic prostaglandin D synthase

TMEM160

Gene (Entity type)

ENSG00000130748 - transmembrane protein 160

COX6B1

Gene (Entity type)

ENSG00000126267 - cytochrome c oxidase subunit 6B1

DYNLRB1

Gene (Entity type)

ENSG00000125971 - dynein light chain roadblock-type 1

BANF1

Gene (Entity type)

ENSG00000175334 - barrier to autointegration nuclear assembly factor 1

MAP2K5

Gene (Entity type)

ENSG00000137764 - mitogen-activated protein kinase kinase 5

BABAM2

Gene (Entity type)

ENSG00000158019 - BRISC and BRCA1 A complex member 2

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.