FGR Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with FGR Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with FGR Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with FGR Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with FGR Up.

Results found

Linked to

	Label	Description
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	SIGIRR Gene (Entity type)	ENSG00000185187 - single Ig and TIR domain containing
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	PPP1CA Gene (Entity type)	ENSG00000172531 - protein phosphatase 1 catalytic subunit alpha
	CFAP20 Gene (Entity type)	ENSG00000070761 - cilia and flagella associated protein 20
	AMZ2 Gene (Entity type)	ENSG00000196704 - archaelysin family metallopeptidase 2
	TXNL4A Gene (Entity type)	ENSG00000141759 - thioredoxin like 4A
	ACYP2 Gene (Entity type)	ENSG00000170634 - acylphosphatase 2
	COX5A Gene (Entity type)	ENSG00000178741 - cytochrome c oxidase subunit 5A

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

SIGIRR

Gene (Entity type)

ENSG00000185187 - single Ig and TIR domain containing

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

PPP1CA

Gene (Entity type)

ENSG00000172531 - protein phosphatase 1 catalytic subunit alpha

CFAP20

Gene (Entity type)

ENSG00000070761 - cilia and flagella associated protein 20

AMZ2

Gene (Entity type)

ENSG00000196704 - archaelysin family metallopeptidase 2

TXNL4A

Gene (Entity type)

ENSG00000141759 - thioredoxin like 4A

ACYP2

Gene (Entity type)

ENSG00000170634 - acylphosphatase 2

COX5A

Gene (Entity type)

ENSG00000178741 - cytochrome c oxidase subunit 5A

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.