GSE52133 LIN-41 knockdown 0 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE52133_LIN-41 knockdown_0_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE52133_LIN-41 knockdown_0_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE52133_LIN-41 knockdown_0_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE52133_LIN-41 knockdown_0_v_2_human_up.

Results found

Linked to

	Label	Description
	AKR1A1 Gene (Entity type)	ENSG00000117448 - aldo-keto reductase family 1 member A1
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	RAB7A Gene (Entity type)	ENSG00000075785 - RAB7A, member RAS oncogene family
	CCNC Gene (Entity type)	ENSG00000112237 - cyclin C
	ARF6 Gene (Entity type)	ENSG00000165527 - ARF GTPase 6
	LTBR Gene (Entity type)	ENSG00000111321 - lymphotoxin beta receptor
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	TUBB4A Gene (Entity type)	ENSG00000104833 - tubulin beta 4A class IVa
	ARCN1 Gene (Entity type)	ENSG00000095139 - archain 1 coat protein complex I subunit delta

AKR1A1

Gene (Entity type)

ENSG00000117448 - aldo-keto reductase family 1 member A1

CAT

Gene (Entity type)

ENSG00000121691 - catalase

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

RAB7A

Gene (Entity type)

ENSG00000075785 - RAB7A, member RAS oncogene family

CCNC

Gene (Entity type)

ENSG00000112237 - cyclin C

ARF6

Gene (Entity type)

ENSG00000165527 - ARF GTPase 6

LTBR

Gene (Entity type)

ENSG00000111321 - lymphotoxin beta receptor

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

TUBB4A

Gene (Entity type)

ENSG00000104833 - tubulin beta 4A class IVa

ARCN1

Gene (Entity type)

ENSG00000095139 - archain 1 coat protein complex I subunit delta

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.