GSE228357 OGA knockdown 5 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE228357_OGA knockdown_5_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE228357_OGA knockdown_5_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE228357_OGA knockdown_5_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE228357_OGA knockdown_5_v_1_human_up.

Results found

Linked to

	Label	Description
	MRPS18B Gene (Entity type)	mitochondrial ribosomal protein S18B
	FAM106A Gene (Entity type)	family with sequence similarity 106 member A
	SNHG16 Gene (Entity type)	small nucleolar RNA host gene 16
	VPS9D1-AS1 Gene (Entity type)	VPS9D1 antisense RNA 1
	TALAM1 Gene (Entity type)	TALAM1 transcript, MALAT1 antisense RNA
	FRG1CP Gene (Entity type)	FSHD region gene 1 family member C, pseudogene
	TPTEP1 Gene (Entity type)	TPTE pseudogene 1
	LINC02582 Gene (Entity type)	long intergenic non-protein coding RNA 2582
	HOXB-AS1 Gene (Entity type)	HOXB cluster antisense RNA 1
	LINC00452 Gene (Entity type)	long intergenic non-protein coding RNA 452

MRPS18B

Gene (Entity type)

mitochondrial ribosomal protein S18B

FAM106A

Gene (Entity type)

family with sequence similarity 106 member A

SNHG16

Gene (Entity type)

small nucleolar RNA host gene 16

VPS9D1-AS1

Gene (Entity type)

VPS9D1 antisense RNA 1

TALAM1

Gene (Entity type)

TALAM1 transcript, MALAT1 antisense RNA

FRG1CP

Gene (Entity type)

FSHD region gene 1 family member C, pseudogene

TPTEP1

Gene (Entity type)

TPTE pseudogene 1

LINC02582

Gene (Entity type)

long intergenic non-protein coding RNA 2582

HOXB-AS1

Gene (Entity type)

HOXB cluster antisense RNA 1

LINC00452

Gene (Entity type)

long intergenic non-protein coding RNA 452

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.