SHPK Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SHPK Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SHPK Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SHPK Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SHPK Down.

Results found

Linked to

	Label	Description
	MRPS18B Gene (Entity type)	ENSG00000204568 - mitochondrial ribosomal protein S18B
	EIF3K Gene (Entity type)	ENSG00000178982 - eukaryotic translation initiation factor 3 subunit K
	SH2B2 Gene (Entity type)	ENSG00000160999 - SH2B adaptor protein 2
	TJP3 Gene (Entity type)	ENSG00000105289 - tight junction protein 3
	EIF3I Gene (Entity type)	ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I
	NSA2 Gene (Entity type)	ENSG00000164346 - NSA2 ribosome biogenesis factor
	PAPPA Gene (Entity type)	ENSG00000182752 - pappalysin 1
	RPL13 Gene (Entity type)	ENSG00000167526 - ribosomal protein L13
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	LLGL2 Gene (Entity type)	ENSG00000073350 - LLGL scribble cell polarity complex component 2

MRPS18B

Gene (Entity type)

ENSG00000204568 - mitochondrial ribosomal protein S18B

EIF3K

Gene (Entity type)

ENSG00000178982 - eukaryotic translation initiation factor 3 subunit K

SH2B2

Gene (Entity type)

ENSG00000160999 - SH2B adaptor protein 2

TJP3

Gene (Entity type)

ENSG00000105289 - tight junction protein 3

EIF3I

Gene (Entity type)

ENSG00000084623 - eukaryotic translation initiation factor 3 subunit I

NSA2

Gene (Entity type)

ENSG00000164346 - NSA2 ribosome biogenesis factor

PAPPA

Gene (Entity type)

ENSG00000182752 - pappalysin 1

RPL13

Gene (Entity type)

ENSG00000167526 - ribosomal protein L13

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

LLGL2

Gene (Entity type)

ENSG00000073350 - LLGL scribble cell polarity complex component 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.