GPX4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GPX4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GPX4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GPX4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GPX4 Up.

Results found

Linked to

	Label	Description
	CYB5R3 Gene (Entity type)	ENSG00000100243 - cytochrome b5 reductase 3
	POLD2 Gene (Entity type)	ENSG00000106628 - DNA polymerase delta 2, accessory subunit
	SOX13 Gene (Entity type)	ENSG00000143842 - SRY-box transcription factor 13
	CLDN5 Gene (Entity type)	ENSG00000184113 - claudin 5
	SOX2 Gene (Entity type)	ENSG00000181449 - SRY-box transcription factor 2
	PRRC2A Gene (Entity type)	ENSG00000204469 - proline rich coiled-coil 2A
	MT3 Gene (Entity type)	ENSG00000087250 - metallothionein 3
	C1QTNF1 Gene (Entity type)	ENSG00000173918 - C1q and TNF related 1
	SAFB2 Gene (Entity type)	ENSG00000130254 - scaffold attachment factor B2
	SLC35A2 Gene (Entity type)	ENSG00000102100 - solute carrier family 35 member A2

CYB5R3

Gene (Entity type)

ENSG00000100243 - cytochrome b5 reductase 3

POLD2

Gene (Entity type)

ENSG00000106628 - DNA polymerase delta 2, accessory subunit

SOX13

Gene (Entity type)

ENSG00000143842 - SRY-box transcription factor 13

CLDN5

Gene (Entity type)

ENSG00000184113 - claudin 5

SOX2

Gene (Entity type)

ENSG00000181449 - SRY-box transcription factor 2

PRRC2A

Gene (Entity type)

ENSG00000204469 - proline rich coiled-coil 2A

MT3

Gene (Entity type)

ENSG00000087250 - metallothionein 3

C1QTNF1

Gene (Entity type)

ENSG00000173918 - C1q and TNF related 1

SAFB2

Gene (Entity type)

ENSG00000130254 - scaffold attachment factor B2

SLC35A2

Gene (Entity type)

ENSG00000102100 - solute carrier family 35 member A2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.