GSE190310 SF3B4 knockdown RNA Small Interfering 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE190310_SF3B4 knockdown_RNA Small Interfering_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	PGRMC1 Gene (Entity type)	ENSG00000101856 - progesterone receptor membrane component 1
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	EIF4E Gene (Entity type)	ENSG00000151247 - eukaryotic translation initiation factor 4E
	MLH1 Gene (Entity type)	ENSG00000076242 - mutL homolog 1
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	CDC123 Gene (Entity type)	ENSG00000151465 - cell division cycle 123
	PSMB2 Gene (Entity type)	ENSG00000126067 - proteasome 20S subunit beta 2
	RRP8 Gene (Entity type)	ENSG00000132275 - ribosomal RNA processing 8

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

PGRMC1

Gene (Entity type)

ENSG00000101856 - progesterone receptor membrane component 1

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

EIF4E

Gene (Entity type)

ENSG00000151247 - eukaryotic translation initiation factor 4E

MLH1

Gene (Entity type)

ENSG00000076242 - mutL homolog 1

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

CDC123

Gene (Entity type)

ENSG00000151465 - cell division cycle 123

PSMB2

Gene (Entity type)

ENSG00000126067 - proteasome 20S subunit beta 2

RRP8

Gene (Entity type)

ENSG00000132275 - ribosomal RNA processing 8

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.