GSE189859 GSE189861 IDH1 knockout 1 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

Results found

Linked to

	Label	Description
	SNHG5 Gene (Entity type)	small nucleolar RNA host gene 5
	LINC02593 Gene (Entity type)	long intergenic non-protein coding RNA 2593
	HEIH Gene (Entity type)	hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA
	PRR34-AS1 Gene (Entity type)	PRR34 antisense RNA 1
	FER1L4 Gene (Entity type)	fer-1 like family member 4 (pseudogene)
	SLC71A3P Gene (Entity type)	solute carrier family 71 member 3, pseudogene
	FBXL19-AS1 Gene (Entity type)	FBXL19 antisense RNA 1
	MTCO1P12 Gene (Entity type)	MT-CO1 pseudogene 12
	TMCC1-DT Gene (Entity type)	TMCC1 divergent transcript
	BCAN-AS2 Gene (Entity type)	BCAN antisense RNA 2

SNHG5

Gene (Entity type)

small nucleolar RNA host gene 5

LINC02593

Gene (Entity type)

long intergenic non-protein coding RNA 2593

HEIH

Gene (Entity type)

hepatocellular carcinoma up-regulated EZH2-associated long non-coding RNA

PRR34-AS1

Gene (Entity type)

PRR34 antisense RNA 1

FER1L4

Gene (Entity type)

fer-1 like family member 4 (pseudogene)

SLC71A3P

Gene (Entity type)

solute carrier family 71 member 3, pseudogene

FBXL19-AS1

Gene (Entity type)

FBXL19 antisense RNA 1

MTCO1P12

Gene (Entity type)

MT-CO1 pseudogene 12

TMCC1-DT

Gene (Entity type)

TMCC1 divergent transcript

BCAN-AS2

Gene (Entity type)

BCAN antisense RNA 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.