GSE189859 GSE189861 IDH1 knockout 1 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE189859_GSE189861_IDH1 knockout_1_v_2_human_up.

Results found

Linked to

	Label	Description
	EGF Gene (Entity type)	ENSG00000138798 - epidermal growth factor
	RPS6 Gene (Entity type)	ENSG00000137154 - ribosomal protein S6
	EIF4A2 Gene (Entity type)	ENSG00000156976 - eukaryotic translation initiation factor 4A2
	VSIR Gene (Entity type)	ENSG00000107738 - V-set immunoregulatory receptor
	CD68 Gene (Entity type)	ENSG00000129226 - CD68 molecule
	SOX13 Gene (Entity type)	ENSG00000143842 - SRY-box transcription factor 13
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	RPL12 Gene (Entity type)	ENSG00000197958 - ribosomal protein L12
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2
	CAPN5 Gene (Entity type)	ENSG00000149260 - calpain 5

EGF

Gene (Entity type)

ENSG00000138798 - epidermal growth factor

RPS6

Gene (Entity type)

ENSG00000137154 - ribosomal protein S6

EIF4A2

Gene (Entity type)

ENSG00000156976 - eukaryotic translation initiation factor 4A2

VSIR

Gene (Entity type)

ENSG00000107738 - V-set immunoregulatory receptor

CD68

Gene (Entity type)

ENSG00000129226 - CD68 molecule

SOX13

Gene (Entity type)

ENSG00000143842 - SRY-box transcription factor 13

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

RPL12

Gene (Entity type)

ENSG00000197958 - ribosomal protein L12

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

CAPN5

Gene (Entity type)

ENSG00000149260 - calpain 5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.