GSE138937 Rad21 CTCF knockdown SLK 2 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE138937_Rad21_CTCF knockdown_SLK_2_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE138937_Rad21_CTCF knockdown_SLK_2_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE138937_Rad21_CTCF knockdown_SLK_2_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE138937_Rad21_CTCF knockdown_SLK_2_v_1_human_up.

Results found

Linked to

	Label	Description
	ASMTL Gene (Entity type)	acetylserotonin O-methyltransferase like
	VAMP7 Gene (Entity type)	vesicle associated membrane protein 7
	CASTOR3P Gene (Entity type)	CASTOR family member 3, pseudogene
	DHRSX Gene (Entity type)	dehydrogenase/reductase X-linked
	MAGI2-AS3 Gene (Entity type)	MAGI2 antisense RNA 3
	MIR210HG Gene (Entity type)	MIR210 host gene
	SMIM10L3 Gene (Entity type)	small integral membrane protein 10 like 3
	SBF2-AS1 Gene (Entity type)	SBF2 antisense RNA 1
	LNCOG Gene (Entity type)	lncRNA osteogenesis associated
	SLC9A7P1 Gene (Entity type)	solute carrier family 9 member 7 pseudogene 1

ASMTL

Gene (Entity type)

acetylserotonin O-methyltransferase like

VAMP7

Gene (Entity type)

vesicle associated membrane protein 7

CASTOR3P

Gene (Entity type)

CASTOR family member 3, pseudogene

DHRSX

Gene (Entity type)

dehydrogenase/reductase X-linked

MAGI2-AS3

Gene (Entity type)

MAGI2 antisense RNA 3

MIR210HG

Gene (Entity type)

MIR210 host gene

SMIM10L3

Gene (Entity type)

small integral membrane protein 10 like 3

SBF2-AS1

Gene (Entity type)

SBF2 antisense RNA 1

LNCOG

Gene (Entity type)

lncRNA osteogenesis associated

SLC9A7P1

Gene (Entity type)

solute carrier family 9 member 7 pseudogene 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.