GSE128076 doxycycline HEK293 2 v 0 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE128076_doxycycline_HEK293_2_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE128076_doxycycline_HEK293_2_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE128076_doxycycline_HEK293_2_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE128076_doxycycline_HEK293_2_v_0_human_dn.

Results found

Linked to

	Label	Description
	RPS18 Gene (Entity type)	ribosomal protein S18
	SNHG16 Gene (Entity type)	small nucleolar RNA host gene 16
	NORAD Gene (Entity type)	non-coding RNA activated by DNA damage
	BAIAP2-DT Gene (Entity type)	BAIAP2 divergent transcript
	MTCO2P12 Gene (Entity type)	MT-CO2 pseudogene 12
	PURPL Gene (Entity type)	p53 upregulated regulator of p53 levels
	VPS9D1-AS1 Gene (Entity type)	VPS9D1 antisense RNA 1
	MTATP6P1 Gene (Entity type)	MT-ATP6 pseudogene 1
	DUSP13A Gene (Entity type)	dual specificity phosphatase 13A
	SORD2P Gene (Entity type)	sorbitol dehydrogenase 2, pseudogene

RPS18

Gene (Entity type)

ribosomal protein S18

SNHG16

Gene (Entity type)

small nucleolar RNA host gene 16

NORAD

Gene (Entity type)

non-coding RNA activated by DNA damage

BAIAP2-DT

Gene (Entity type)

BAIAP2 divergent transcript

MTCO2P12

Gene (Entity type)

MT-CO2 pseudogene 12

PURPL

Gene (Entity type)

p53 upregulated regulator of p53 levels

VPS9D1-AS1

Gene (Entity type)

VPS9D1 antisense RNA 1

MTATP6P1

Gene (Entity type)

MT-ATP6 pseudogene 1

DUSP13A

Gene (Entity type)

dual specificity phosphatase 13A

SORD2P

Gene (Entity type)

sorbitol dehydrogenase 2, pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.