GSE208568 ERBB Trim21 knockdown 1 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE208568_ERBB_Trim21 knockdown_1_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE208568_ERBB_Trim21 knockdown_1_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE208568_ERBB_Trim21 knockdown_1_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE208568_ERBB_Trim21 knockdown_1_v_2_human_up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	CSNK2A2 Gene (Entity type)	ENSG00000070770 - casein kinase 2 alpha 2
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	PLCG1 Gene (Entity type)	ENSG00000124181 - phospholipase C gamma 1
	SLC22A5 Gene (Entity type)	ENSG00000197375 - solute carrier family 22 member 5
	S1PR3 Gene (Entity type)	ENSG00000213694 - sphingosine-1-phosphate receptor 3
	ADCY3 Gene (Entity type)	ENSG00000138031 - adenylate cyclase 3
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

CSNK2A2

Gene (Entity type)

ENSG00000070770 - casein kinase 2 alpha 2

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

PLCG1

Gene (Entity type)

ENSG00000124181 - phospholipase C gamma 1

SLC22A5

Gene (Entity type)

ENSG00000197375 - solute carrier family 22 member 5

S1PR3

Gene (Entity type)

ENSG00000213694 - sphingosine-1-phosphate receptor 3

ADCY3

Gene (Entity type)

ENSG00000138031 - adenylate cyclase 3

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.