CA3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CA3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CA3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CA3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CA3 Up.

Results found

Linked to

	Label	Description
	PPP1R9A Gene (Entity type)	ENSG00000158528 - protein phosphatase 1 regulatory subunit 9A
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	PPIE Gene (Entity type)	ENSG00000084072 - peptidylprolyl isomerase E
	CALCB Gene (Entity type)	ENSG00000175868 - calcitonin related polypeptide beta
	N4BP1 Gene (Entity type)	ENSG00000102921 - NEDD4 binding protein 1
	LRPAP1 Gene (Entity type)	ENSG00000163956 - LDL receptor related protein associated protein 1
	RPH3AL Gene (Entity type)	ENSG00000181031 - rabphilin 3A like (without C2 domains)
	MAP9 Gene (Entity type)	ENSG00000164114 - microtubule associated protein 9
	TMEM41B Gene (Entity type)	ENSG00000166471 - transmembrane protein 41B

PPP1R9A

Gene (Entity type)

ENSG00000158528 - protein phosphatase 1 regulatory subunit 9A

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

PPIE

Gene (Entity type)

ENSG00000084072 - peptidylprolyl isomerase E

CALCB

Gene (Entity type)

ENSG00000175868 - calcitonin related polypeptide beta

N4BP1

Gene (Entity type)

ENSG00000102921 - NEDD4 binding protein 1

LRPAP1

Gene (Entity type)

ENSG00000163956 - LDL receptor related protein associated protein 1

RPH3AL

Gene (Entity type)

ENSG00000181031 - rabphilin 3A like (without C2 domains)

MAP9

Gene (Entity type)

ENSG00000164114 - microtubule associated protein 9

TMEM41B

Gene (Entity type)

ENSG00000166471 - transmembrane protein 41B

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.