GSE186486 SF3B1 DDX42 overexpression HEK293T 5 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE186486_SF3B1_DDX42 overexpression_HEK293T_5_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE186486_SF3B1_DDX42 overexpression_HEK293T_5_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE186486_SF3B1_DDX42 overexpression_HEK293T_5_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE186486_SF3B1_DDX42 overexpression_HEK293T_5_v_0_human_dn.

Results found

Linked to

	Label	Description
	SYNE3-AS1 Gene (Entity type)	ENSG00000258572 - SYNE3 antisense RNA 1
	ACTG1P21 Gene (Entity type)	ENSG00000232672 - actin gamma 1 pseudogene 21
	RPL32P18 Gene (Entity type)	ENSG00000146677 - ribosomal protein L32 pseudogene 18
	H3P13 Gene (Entity type)	ENSG00000243977 - H3 histone pseudogene 13
	OR10V3P Gene (Entity type)	ENSG00000254743 - olfactory receptor family 10 subfamily V member 3 pseudogene
	SNORD9 Gene (Entity type)	ENSG00000199436 - small nucleolar RNA, C/D box 9
	LOC124901048 Gene (Entity type)	ENSG00000248709 - uncharacterized LOC124901048
	MIR5087 Gene (Entity type)	ENSG00000283676 - microRNA 5087
	TMPRSS11CP Gene (Entity type)	ENSG00000232398 - transmembrane serine protease 11C, pseudogene
	RPS12P17 Gene (Entity type)	ENSG00000233163 - ribosomal protein S12 pseudogene 17

SYNE3-AS1

Gene (Entity type)

ENSG00000258572 - SYNE3 antisense RNA 1

ACTG1P21

Gene (Entity type)

ENSG00000232672 - actin gamma 1 pseudogene 21

RPL32P18

Gene (Entity type)

ENSG00000146677 - ribosomal protein L32 pseudogene 18

H3P13

Gene (Entity type)

ENSG00000243977 - H3 histone pseudogene 13

OR10V3P

Gene (Entity type)

ENSG00000254743 - olfactory receptor family 10 subfamily V member 3 pseudogene

SNORD9

Gene (Entity type)

ENSG00000199436 - small nucleolar RNA, C/D box 9

LOC124901048

Gene (Entity type)

ENSG00000248709 - uncharacterized LOC124901048

MIR5087

Gene (Entity type)

ENSG00000283676 - microRNA 5087

TMPRSS11CP

Gene (Entity type)

ENSG00000232398 - transmembrane serine protease 11C, pseudogene

RPS12P17

Gene (Entity type)

ENSG00000233163 - ribosomal protein S12 pseudogene 17

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.