GSE77829 SLIRP knockdown LNCaP 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE77829_SLIRP knockdown_LNCaP_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE77829_SLIRP knockdown_LNCaP_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE77829_SLIRP knockdown_LNCaP_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE77829_SLIRP knockdown_LNCaP_3_v_1_human_up.

Results found

Linked to

	Label	Description
	PGRMC1 Gene (Entity type)	ENSG00000101856 - progesterone receptor membrane component 1
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	OXSR1 Gene (Entity type)	ENSG00000172939 - oxidative stress responsive kinase 1
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	NRAS Gene (Entity type)	ENSG00000213281 - NRAS proto-oncogene, GTPase
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	MLH1 Gene (Entity type)	ENSG00000076242 - mutL homolog 1
	MAPK9 Gene (Entity type)	ENSG00000050748 - mitogen-activated protein kinase 9
	PSMG1 Gene (Entity type)	ENSG00000183527 - proteasome assembly chaperone 1
	PSMB2 Gene (Entity type)	ENSG00000126067 - proteasome 20S subunit beta 2

PGRMC1

Gene (Entity type)

ENSG00000101856 - progesterone receptor membrane component 1

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

OXSR1

Gene (Entity type)

ENSG00000172939 - oxidative stress responsive kinase 1

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

NRAS

Gene (Entity type)

ENSG00000213281 - NRAS proto-oncogene, GTPase

CAT

Gene (Entity type)

ENSG00000121691 - catalase

MLH1

Gene (Entity type)

ENSG00000076242 - mutL homolog 1

MAPK9

Gene (Entity type)

ENSG00000050748 - mitogen-activated protein kinase 9

PSMG1

Gene (Entity type)

ENSG00000183527 - proteasome assembly chaperone 1

PSMB2

Gene (Entity type)

ENSG00000126067 - proteasome 20S subunit beta 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.