SIRPG Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SIRPG Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SIRPG Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SIRPG Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SIRPG Up.

Results found

Linked to

	Label	Description
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	COL17A1 Gene (Entity type)	ENSG00000065618 - collagen type XVII alpha 1 chain
	SVEP1 Gene (Entity type)	ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
	IVL Gene (Entity type)	ENSG00000163207 - involucrin
	TGM1 Gene (Entity type)	ENSG00000092295 - transglutaminase 1
	UBA6 Gene (Entity type)	ENSG00000033178 - ubiquitin like modifier activating enzyme 6
	WDR45B Gene (Entity type)	ENSG00000141580 - WD repeat domain 45B
	GJB3 Gene (Entity type)	ENSG00000188910 - gap junction protein beta 3
	AQP5 Gene (Entity type)	ENSG00000161798 - aquaporin 5

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

COL17A1

Gene (Entity type)

ENSG00000065618 - collagen type XVII alpha 1 chain

SVEP1

Gene (Entity type)

ENSG00000165124 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1

IVL

Gene (Entity type)

ENSG00000163207 - involucrin

TGM1

Gene (Entity type)

ENSG00000092295 - transglutaminase 1

UBA6

Gene (Entity type)

ENSG00000033178 - ubiquitin like modifier activating enzyme 6

WDR45B

Gene (Entity type)

ENSG00000141580 - WD repeat domain 45B

GJB3

Gene (Entity type)

ENSG00000188910 - gap junction protein beta 3

AQP5

Gene (Entity type)

ENSG00000161798 - aquaporin 5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.