GSE173116 GSE173118 ML-7 4 v 5 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE173116_GSE173118_ML-7_4_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE173116_GSE173118_ML-7_4_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE173116_GSE173118_ML-7_4_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE173116_GSE173118_ML-7_4_v_5_human_up.

Results found

Linked to

	Label	Description
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	ROCK2 Gene (Entity type)	ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2
	DTX3L Gene (Entity type)	ENSG00000163840 - deltex E3 ubiquitin ligase 3L
	PTGR1 Gene (Entity type)	ENSG00000106853 - prostaglandin reductase 1
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	TM9SF2 Gene (Entity type)	ENSG00000125304 - transmembrane 9 superfamily member 2

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

ROCK2

Gene (Entity type)

ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2

DTX3L

Gene (Entity type)

ENSG00000163840 - deltex E3 ubiquitin ligase 3L

PTGR1

Gene (Entity type)

ENSG00000106853 - prostaglandin reductase 1

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

TM9SF2

Gene (Entity type)

ENSG00000125304 - transmembrane 9 superfamily member 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.