GSE107932 TRIM52 knockdown U-87MG Uppsala 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE107932_TRIM52 knockdown_U-87MG Uppsala_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE107932_TRIM52 knockdown_U-87MG Uppsala_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE107932_TRIM52 knockdown_U-87MG Uppsala_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE107932_TRIM52 knockdown_U-87MG Uppsala_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	SCARNA7 Gene (Entity type)	ENSG00000238741 - small Cajal body-specific RNA 7
	PAIP1P1 Gene (Entity type)	ENSG00000233892 - PAIP1 pseudogene 1
	LOC400036 Gene (Entity type)	ENSG00000257616 - DEAD-box helicase 23 pseudogene
	LINC02093 Gene (Entity type)	ENSG00000234634 - long intergenic non-protein coding RNA 2093
	MTCO3P43 Gene (Entity type)	ENSG00000227788 - MT-CO3 pseudogene 43
	FAM223A Gene (Entity type)	ENSG00000279245 - family with sequence similarity 223 member A
	SNX2P1 Gene (Entity type)	ENSG00000270585 - sorting nexin 2 pseudogene 1
	FAM223B Gene (Entity type)	ENSG00000272681 - family with sequence similarity 223 member B
	LINC01467 Gene (Entity type)	ENSG00000258977 - long intergenic non-protein coding RNA 1467
	VN2R10P Gene (Entity type)	ENSG00000226348 - vomeronasal 2 receptor 10, pseudogene

SCARNA7

Gene (Entity type)

ENSG00000238741 - small Cajal body-specific RNA 7

PAIP1P1

Gene (Entity type)

ENSG00000233892 - PAIP1 pseudogene 1

LOC400036

Gene (Entity type)

ENSG00000257616 - DEAD-box helicase 23 pseudogene

LINC02093

Gene (Entity type)

ENSG00000234634 - long intergenic non-protein coding RNA 2093

MTCO3P43

Gene (Entity type)

ENSG00000227788 - MT-CO3 pseudogene 43

FAM223A

Gene (Entity type)

ENSG00000279245 - family with sequence similarity 223 member A

SNX2P1

Gene (Entity type)

ENSG00000270585 - sorting nexin 2 pseudogene 1

FAM223B

Gene (Entity type)

ENSG00000272681 - family with sequence similarity 223 member B

LINC01467

Gene (Entity type)

ENSG00000258977 - long intergenic non-protein coding RNA 1467

VN2R10P

Gene (Entity type)

ENSG00000226348 - vomeronasal 2 receptor 10, pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.