PTGDS Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTGDS Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTGDS Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTGDS Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTGDS Down.

Results found

Linked to

	Label	Description
	NDUFA6 Gene (Entity type)	ENSG00000184983 - NADH:ubiquinone oxidoreductase subunit A6
	IQSEC1 Gene (Entity type)	ENSG00000144711 - IQ motif and Sec7 domain ArfGEF 1
	NARF Gene (Entity type)	ENSG00000141562 - nuclear prelamin A recognition factor
	PRRC2A Gene (Entity type)	ENSG00000204469 - proline rich coiled-coil 2A
	MTR Gene (Entity type)	ENSG00000116984 - 5-methyltetrahydrofolate-homocysteine methyltransferase
	SV2C Gene (Entity type)	ENSG00000122012 - synaptic vesicle glycoprotein 2C
	RAC1 Gene (Entity type)	ENSG00000136238 - Rac family small GTPase 1
	LIN28A Gene (Entity type)	ENSG00000131914 - lin-28 RNA binding posttranscriptional regulator A
	SLC38A4 Gene (Entity type)	ENSG00000139209 - solute carrier family 38 member 4
	SNRNP40 Gene (Entity type)	ENSG00000060688 - small nuclear ribonucleoprotein U5 subunit 40

NDUFA6

Gene (Entity type)

ENSG00000184983 - NADH:ubiquinone oxidoreductase subunit A6

IQSEC1

Gene (Entity type)

ENSG00000144711 - IQ motif and Sec7 domain ArfGEF 1

NARF

Gene (Entity type)

ENSG00000141562 - nuclear prelamin A recognition factor

PRRC2A

Gene (Entity type)

ENSG00000204469 - proline rich coiled-coil 2A

MTR

Gene (Entity type)

ENSG00000116984 - 5-methyltetrahydrofolate-homocysteine methyltransferase

SV2C

Gene (Entity type)

ENSG00000122012 - synaptic vesicle glycoprotein 2C

RAC1

Gene (Entity type)

ENSG00000136238 - Rac family small GTPase 1

LIN28A

Gene (Entity type)

ENSG00000131914 - lin-28 RNA binding posttranscriptional regulator A

SLC38A4

Gene (Entity type)

ENSG00000139209 - solute carrier family 38 member 4

SNRNP40

Gene (Entity type)

ENSG00000060688 - small nuclear ribonucleoprotein U5 subunit 40

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.