ZMAT3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ZMAT3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ZMAT3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ZMAT3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ZMAT3 Up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	ACBD3 Gene (Entity type)	ENSG00000182827 - acyl-CoA binding domain containing 3
	SAR1A Gene (Entity type)	ENSG00000079332 - secretion associated Ras related GTPase 1A
	CREBBP Gene (Entity type)	ENSG00000005339 - CREB binding lysine acetyltransferase
	SEC24A Gene (Entity type)	ENSG00000113615 - SEC24 homolog A, COPII component
	GAS2 Gene (Entity type)	ENSG00000148935 - growth arrest specific 2
	MAP9 Gene (Entity type)	ENSG00000164114 - microtubule associated protein 9
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase
	PRRC2C Gene (Entity type)	ENSG00000117523 - proline rich coiled-coil 2C

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

ACBD3

Gene (Entity type)

ENSG00000182827 - acyl-CoA binding domain containing 3

SAR1A

Gene (Entity type)

ENSG00000079332 - secretion associated Ras related GTPase 1A

CREBBP

Gene (Entity type)

ENSG00000005339 - CREB binding lysine acetyltransferase

SEC24A

Gene (Entity type)

ENSG00000113615 - SEC24 homolog A, COPII component

GAS2

Gene (Entity type)

ENSG00000148935 - growth arrest specific 2

MAP9

Gene (Entity type)

ENSG00000164114 - microtubule associated protein 9

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

PRRC2C

Gene (Entity type)

ENSG00000117523 - proline rich coiled-coil 2C

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CFDE Workbench

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.