GSE193739 CGA knockdown 3 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE193739_CGA knockdown_3_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE193739_CGA knockdown_3_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE193739_CGA knockdown_3_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE193739_CGA knockdown_3_v_1_human_dn.

Results found

Linked to

	Label	Description
	EGF Gene (Entity type)	ENSG00000138798 - epidermal growth factor
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	PGRMC1 Gene (Entity type)	ENSG00000101856 - progesterone receptor membrane component 1
	OXSR1 Gene (Entity type)	ENSG00000172939 - oxidative stress responsive kinase 1
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	ZNF32 Gene (Entity type)	ENSG00000169740 - zinc finger protein 32
	MCCC1 Gene (Entity type)	ENSG00000078070 - methylcrotonyl-CoA carboxylase subunit 1

EGF

Gene (Entity type)

ENSG00000138798 - epidermal growth factor

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

PGRMC1

Gene (Entity type)

ENSG00000101856 - progesterone receptor membrane component 1

OXSR1

Gene (Entity type)

ENSG00000172939 - oxidative stress responsive kinase 1

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

ZNF32

Gene (Entity type)

ENSG00000169740 - zinc finger protein 32

MCCC1

Gene (Entity type)

ENSG00000078070 - methylcrotonyl-CoA carboxylase subunit 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.