GSE207410 GSE207411 ARID1A knockdown 7 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE207410_GSE207411_ARID1A knockdown_7_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE207410_GSE207411_ARID1A knockdown_7_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE207410_GSE207411_ARID1A knockdown_7_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE207410_GSE207411_ARID1A knockdown_7_v_0_human_dn.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	EXT2 Gene (Entity type)	ENSG00000151348 - exostosin glycosyltransferase 2
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	ATMIN Gene (Entity type)	ENSG00000166454 - ATM interactor
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	PRPS1 Gene (Entity type)	ENSG00000147224 - phosphoribosyl pyrophosphate synthetase 1
	NSF Gene (Entity type)	ENSG00000073969 - N-ethylmaleimide sensitive factor, vesicle fusing ATPase
	ASCC3 Gene (Entity type)	ENSG00000112249 - activating signal cointegrator 1 complex subunit 3

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

EXT2

Gene (Entity type)

ENSG00000151348 - exostosin glycosyltransferase 2

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

ATMIN

Gene (Entity type)

ENSG00000166454 - ATM interactor

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

PRPS1

Gene (Entity type)

ENSG00000147224 - phosphoribosyl pyrophosphate synthetase 1

NSF

Gene (Entity type)

ENSG00000073969 - N-ethylmaleimide sensitive factor, vesicle fusing ATPase

ASCC3

Gene (Entity type)

ENSG00000112249 - activating signal cointegrator 1 complex subunit 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.