BOP1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BOP1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BOP1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BOP1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BOP1 Up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	NRBF2 Gene (Entity type)	ENSG00000148572 - nuclear receptor binding factor 2
	ATF6 Gene (Entity type)	ENSG00000118217 - activating transcription factor 6
	LANCL2 Gene (Entity type)	ENSG00000132434 - LanC like glutathione S-transferase 2
	INTS6 Gene (Entity type)	ENSG00000102786 - integrator complex subunit 6
	GPR87 Gene (Entity type)	ENSG00000138271 - G protein-coupled receptor 87
	REL Gene (Entity type)	ENSG00000162924 - REL proto-oncogene, NF-kB subunit
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	STN1 Gene (Entity type)	ENSG00000107960 - STN1 subunit of CST complex

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

NRBF2

Gene (Entity type)

ENSG00000148572 - nuclear receptor binding factor 2

ATF6

Gene (Entity type)

ENSG00000118217 - activating transcription factor 6

LANCL2

Gene (Entity type)

ENSG00000132434 - LanC like glutathione S-transferase 2

INTS6

Gene (Entity type)

ENSG00000102786 - integrator complex subunit 6

GPR87

Gene (Entity type)

ENSG00000138271 - G protein-coupled receptor 87

REL

Gene (Entity type)

ENSG00000162924 - REL proto-oncogene, NF-kB subunit

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

STN1

Gene (Entity type)

ENSG00000107960 - STN1 subunit of CST complex

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.