TRRAP Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TRRAP Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TRRAP Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TRRAP Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TRRAP Down.

Results found

Linked to

	Label	Description
	CDC123 Gene (Entity type)	ENSG00000151465 - cell division cycle 123
	GABPB1 Gene (Entity type)	ENSG00000104064 - GA binding protein transcription factor subunit beta 1
	MEX3C Gene (Entity type)	ENSG00000176624 - mex-3 RNA binding family member C
	EMILIN1 Gene (Entity type)	ENSG00000138080 - elastin microfibril interfacer 1
	SMCHD1 Gene (Entity type)	ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1
	PDSS1 Gene (Entity type)	ENSG00000148459 - decaprenyl diphosphate synthase subunit 1
	ARHGDIA Gene (Entity type)	ENSG00000141522 - Rho GDP dissociation inhibitor alpha
	SNRPA Gene (Entity type)	ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A
	POLR1E Gene (Entity type)	ENSG00000137054 - RNA polymerase I subunit E
	WDR12 Gene (Entity type)	ENSG00000138442 - WD repeat domain 12

CDC123

Gene (Entity type)

ENSG00000151465 - cell division cycle 123

GABPB1

Gene (Entity type)

ENSG00000104064 - GA binding protein transcription factor subunit beta 1

MEX3C

Gene (Entity type)

ENSG00000176624 - mex-3 RNA binding family member C

EMILIN1

Gene (Entity type)

ENSG00000138080 - elastin microfibril interfacer 1

SMCHD1

Gene (Entity type)

ENSG00000101596 - structural maintenance of chromosomes flexible hinge domain containing 1

PDSS1

Gene (Entity type)

ENSG00000148459 - decaprenyl diphosphate synthase subunit 1

ARHGDIA

Gene (Entity type)

ENSG00000141522 - Rho GDP dissociation inhibitor alpha

SNRPA

Gene (Entity type)

ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A

POLR1E

Gene (Entity type)

ENSG00000137054 - RNA polymerase I subunit E

WDR12

Gene (Entity type)

ENSG00000138442 - WD repeat domain 12

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Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.