GSE133927 PTEN p53 Meox1 knockdown BT-549 RNA Small Interfering 1 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE133927_PTEN_p53_Meox1 knockdown_BT-549_RNA Small Interfering_1_v_3_human_up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	OXSR1 Gene (Entity type)	ENSG00000172939 - oxidative stress responsive kinase 1
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	DFFA Gene (Entity type)	ENSG00000160049 - DNA fragmentation factor subunit alpha
	GRB2 Gene (Entity type)	ENSG00000177885 - growth factor receptor bound protein 2
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	CDC123 Gene (Entity type)	ENSG00000151465 - cell division cycle 123
	PSMB2 Gene (Entity type)	ENSG00000126067 - proteasome 20S subunit beta 2
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	PSMD4 Gene (Entity type)	ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

OXSR1

Gene (Entity type)

ENSG00000172939 - oxidative stress responsive kinase 1

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

DFFA

Gene (Entity type)

ENSG00000160049 - DNA fragmentation factor subunit alpha

GRB2

Gene (Entity type)

ENSG00000177885 - growth factor receptor bound protein 2

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

CDC123

Gene (Entity type)

ENSG00000151465 - cell division cycle 123

PSMB2

Gene (Entity type)

ENSG00000126067 - proteasome 20S subunit beta 2

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

PSMD4

Gene (Entity type)

ENSG00000159352 - proteasome 26S subunit ubiquitin receptor, non-ATPase 4

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.