SKAP2 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SKAP2 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SKAP2 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SKAP2 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SKAP2 Up.

Results found

Linked to

	Label	Description
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	MTCL2 Gene (Entity type)	ENSG00000149639 - microtubule crosslinking factor 2
	FCN3 Gene (Entity type)	ENSG00000142748 - ficolin 3
	ACYP2 Gene (Entity type)	ENSG00000170634 - acylphosphatase 2
	KIAA0319L Gene (Entity type)	ENSG00000142687 - KIAA0319 like
	MYOZ2 Gene (Entity type)	ENSG00000172399 - myozenin 2
	LRRC37A3 Gene (Entity type)	ENSG00000176809 - leucine rich repeat containing 37 member A3
	COX15 Gene (Entity type)	ENSG00000014919 - cytochrome c oxidase assembly factor COX15
	CUEDC2 Gene (Entity type)	ENSG00000107874 - CUE domain containing 2
	PHC3 Gene (Entity type)	ENSG00000173889 - polyhomeotic homolog 3

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

MTCL2

Gene (Entity type)

ENSG00000149639 - microtubule crosslinking factor 2

FCN3

Gene (Entity type)

ENSG00000142748 - ficolin 3

ACYP2

Gene (Entity type)

ENSG00000170634 - acylphosphatase 2

KIAA0319L

Gene (Entity type)

ENSG00000142687 - KIAA0319 like

MYOZ2

Gene (Entity type)

ENSG00000172399 - myozenin 2

LRRC37A3

Gene (Entity type)

ENSG00000176809 - leucine rich repeat containing 37 member A3

COX15

Gene (Entity type)

ENSG00000014919 - cytochrome c oxidase assembly factor COX15

CUEDC2

Gene (Entity type)

ENSG00000107874 - CUE domain containing 2

PHC3

Gene (Entity type)

ENSG00000173889 - polyhomeotic homolog 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.