GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 0 v 9 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_9_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_9_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_9_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_0_v_9_human_up.

Results found

Linked to

	Label	Description
	PJA1 Gene (Entity type)	ENSG00000181191 - praja ring finger ubiquitin ligase 1
	SLC22A5 Gene (Entity type)	ENSG00000197375 - solute carrier family 22 member 5
	BMPR1A Gene (Entity type)	ENSG00000107779 - bone morphogenetic protein receptor type 1A
	B4GALT4 Gene (Entity type)	ENSG00000121578 - beta-1,4-galactosyltransferase 4
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47
	AGPAT3 Gene (Entity type)	ENSG00000160216 - 1-acylglycerol-3-phosphate O-acyltransferase 3
	IGSF1 Gene (Entity type)	ENSG00000147255 - immunoglobulin superfamily member 1
	PRICKLE1 Gene (Entity type)	ENSG00000139174 - prickle planar cell polarity protein 1
	AFF3 Gene (Entity type)	ENSG00000144218 - ALF transcription elongation factor 3

PJA1

Gene (Entity type)

ENSG00000181191 - praja ring finger ubiquitin ligase 1

SLC22A5

Gene (Entity type)

ENSG00000197375 - solute carrier family 22 member 5

BMPR1A

Gene (Entity type)

ENSG00000107779 - bone morphogenetic protein receptor type 1A

B4GALT4

Gene (Entity type)

ENSG00000121578 - beta-1,4-galactosyltransferase 4

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

AGPAT3

Gene (Entity type)

ENSG00000160216 - 1-acylglycerol-3-phosphate O-acyltransferase 3

IGSF1

Gene (Entity type)

ENSG00000147255 - immunoglobulin superfamily member 1

PRICKLE1

Gene (Entity type)

ENSG00000139174 - prickle planar cell polarity protein 1

AFF3

Gene (Entity type)

ENSG00000144218 - ALF transcription elongation factor 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.