UBE2N Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with UBE2N Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with UBE2N Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with UBE2N Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with UBE2N Up.

Results found

Linked to

	Label	Description
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	EXOSC8 Gene (Entity type)	ENSG00000120699 - exosome component 8
	ALG5 Gene (Entity type)	ENSG00000120697 - ALG5 dolichyl-phosphate beta-glucosyltransferase
	CLDN5 Gene (Entity type)	ENSG00000184113 - claudin 5
	PANK2 Gene (Entity type)	ENSG00000125779 - pantothenate kinase 2
	BANF1 Gene (Entity type)	ENSG00000175334 - barrier to autointegration nuclear assembly factor 1
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	VAMP3 Gene (Entity type)	ENSG00000049245 - vesicle associated membrane protein 3
	TIPIN Gene (Entity type)	ENSG00000075131 - TIMELESS interacting protein
	NUDT15 Gene (Entity type)	ENSG00000136159 - nudix hydrolase 15

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

EXOSC8

Gene (Entity type)

ENSG00000120699 - exosome component 8

ALG5

Gene (Entity type)

ENSG00000120697 - ALG5 dolichyl-phosphate beta-glucosyltransferase

CLDN5

Gene (Entity type)

ENSG00000184113 - claudin 5

PANK2

Gene (Entity type)

ENSG00000125779 - pantothenate kinase 2

BANF1

Gene (Entity type)

ENSG00000175334 - barrier to autointegration nuclear assembly factor 1

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

VAMP3

Gene (Entity type)

ENSG00000049245 - vesicle associated membrane protein 3

TIPIN

Gene (Entity type)

ENSG00000075131 - TIMELESS interacting protein

NUDT15

Gene (Entity type)

ENSG00000136159 - nudix hydrolase 15

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.