HINT3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HINT3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HINT3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HINT3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HINT3 Up.

Results found

Linked to

	Label	Description
	CMTR1 Gene (Entity type)	ENSG00000137200 - cap methyltransferase 1
	ZNF140 Gene (Entity type)	ENSG00000196387 - zinc finger protein 140
	RPS6KB1 Gene (Entity type)	ENSG00000108443 - ribosomal protein S6 kinase B1
	PIK3CB Gene (Entity type)	ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
	CLEC16A Gene (Entity type)	ENSG00000038532 - C-type lectin domain containing 16A
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2
	NFIC Gene (Entity type)	ENSG00000141905 - nuclear factor I C
	AP3D1 Gene (Entity type)	ENSG00000065000 - adaptor related protein complex 3 subunit delta 1
	IPCEF1 Gene (Entity type)	ENSG00000074706 - interaction protein for cytohesin exchange factors 1
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1

CMTR1

Gene (Entity type)

ENSG00000137200 - cap methyltransferase 1

ZNF140

Gene (Entity type)

ENSG00000196387 - zinc finger protein 140

RPS6KB1

Gene (Entity type)

ENSG00000108443 - ribosomal protein S6 kinase B1

PIK3CB

Gene (Entity type)

ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta

CLEC16A

Gene (Entity type)

ENSG00000038532 - C-type lectin domain containing 16A

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

NFIC

Gene (Entity type)

ENSG00000141905 - nuclear factor I C

AP3D1

Gene (Entity type)

ENSG00000065000 - adaptor related protein complex 3 subunit delta 1

IPCEF1

Gene (Entity type)

ENSG00000074706 - interaction protein for cytohesin exchange factors 1

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.