PKN2 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PKN2 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PKN2 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PKN2 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PKN2 Down.

Results found

Linked to

	Label	Description
	RBCK1 Gene (Entity type)	ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	CASD1 Gene (Entity type)	ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1
	MMRN1 Gene (Entity type)	ENSG00000138722 - multimerin 1
	NXT1 Gene (Entity type)	ENSG00000132661 - nuclear transport factor 2 like export factor 1
	ESM1 Gene (Entity type)	ENSG00000164283 - endothelial cell specific molecule 1
	CDC42EP1 Gene (Entity type)	ENSG00000128283 - CDC42 effector protein 1
	COX7A2 Gene (Entity type)	ENSG00000112695 - cytochrome c oxidase subunit 7A2

RBCK1

Gene (Entity type)

ENSG00000125826 - RANBP2-type and C3HC4-type zinc finger containing 1

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

CASD1

Gene (Entity type)

ENSG00000127995 - CAS1 domain sialic acid O acetyltransferase 1

MMRN1

Gene (Entity type)

ENSG00000138722 - multimerin 1

NXT1

Gene (Entity type)

ENSG00000132661 - nuclear transport factor 2 like export factor 1

ESM1

Gene (Entity type)

ENSG00000164283 - endothelial cell specific molecule 1

CDC42EP1

Gene (Entity type)

ENSG00000128283 - CDC42 effector protein 1

COX7A2

Gene (Entity type)

ENSG00000112695 - cytochrome c oxidase subunit 7A2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.