SLK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SLK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SLK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SLK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SLK Up.

Results found

Linked to

	Label	Description
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta
	TMEM41B Gene (Entity type)	ENSG00000166471 - transmembrane protein 41B
	FAM169A Gene (Entity type)	ENSG00000198780 - family with sequence similarity 169 member A
	CD2AP Gene (Entity type)	ENSG00000198087 - CD2 associated protein
	ARC Gene (Entity type)	ENSG00000198576 - activity regulated cytoskeleton associated protein
	MOB4 Gene (Entity type)	ENSG00000115540 - MOB family member 4, phocein
	SERHL2 Gene (Entity type)	ENSG00000183569 - serine hydrolase like 2
	PANX1 Gene (Entity type)	ENSG00000110218 - pannexin 1
	SLAMF1 Gene (Entity type)	ENSG00000117090 - signaling lymphocytic activation molecule family member 1

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

TMEM41B

Gene (Entity type)

ENSG00000166471 - transmembrane protein 41B

FAM169A

Gene (Entity type)

ENSG00000198780 - family with sequence similarity 169 member A

CD2AP

Gene (Entity type)

ENSG00000198087 - CD2 associated protein

ARC

Gene (Entity type)

ENSG00000198576 - activity regulated cytoskeleton associated protein

MOB4

Gene (Entity type)

ENSG00000115540 - MOB family member 4, phocein

SERHL2

Gene (Entity type)

ENSG00000183569 - serine hydrolase like 2

PANX1

Gene (Entity type)

ENSG00000110218 - pannexin 1

SLAMF1

Gene (Entity type)

ENSG00000117090 - signaling lymphocytic activation molecule family member 1

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.