ITPKC Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with ITPKC Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with ITPKC Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with ITPKC Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with ITPKC Up.

Results found

Linked to

	Label	Description
	C2 Gene (Entity type)	ENSG00000166278 - complement C2
	CCL13 Gene (Entity type)	ENSG00000181374 - C-C motif chemokine ligand 13
	PAIP1 Gene (Entity type)	ENSG00000172239 - poly(A) binding protein interacting protein 1
	STK3 Gene (Entity type)	ENSG00000104375 - serine/threonine kinase 3
	SLK Gene (Entity type)	ENSG00000065613 - STE20 like kinase
	MEOX1 Gene (Entity type)	ENSG00000005102 - mesenchyme homeobox 1
	GLT8D1 Gene (Entity type)	ENSG00000016864 - glycosyltransferase 8 domain containing 1
	NEK4 Gene (Entity type)	ENSG00000114904 - NIMA related kinase 4
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	CEP350 Gene (Entity type)	ENSG00000135837 - centrosomal protein 350

Gene (Entity type)

ENSG00000166278 - complement C2

CCL13

Gene (Entity type)

ENSG00000181374 - C-C motif chemokine ligand 13

PAIP1

Gene (Entity type)

ENSG00000172239 - poly(A) binding protein interacting protein 1

STK3

Gene (Entity type)

ENSG00000104375 - serine/threonine kinase 3

SLK

Gene (Entity type)

ENSG00000065613 - STE20 like kinase

MEOX1

Gene (Entity type)

ENSG00000005102 - mesenchyme homeobox 1

GLT8D1

Gene (Entity type)

ENSG00000016864 - glycosyltransferase 8 domain containing 1

NEK4

Gene (Entity type)

ENSG00000114904 - NIMA related kinase 4

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

CEP350

Gene (Entity type)

ENSG00000135837 - centrosomal protein 350

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.