CFP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CFP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CFP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CFP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CFP Up.

Results found

Linked to

	Label	Description
	HPN Gene (Entity type)	ENSG00000105707 - hepsin
	CDC34 Gene (Entity type)	ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme
	MGRN1 Gene (Entity type)	ENSG00000102858 - mahogunin ring finger 1
	SMURF1 Gene (Entity type)	ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1
	U2AF2 Gene (Entity type)	ENSG00000063244 - U2 small nuclear RNA auxiliary factor 2
	NECTIN2 Gene (Entity type)	ENSG00000130202 - nectin cell adhesion molecule 2
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f
	GGA1 Gene (Entity type)	ENSG00000100083 - golgi associated, gamma adaptin ear containing, ARF binding protein 1
	PNPLA2 Gene (Entity type)	ENSG00000177666 - patatin like domain 2, triacylglycerol lipase
	GOLGA4 Gene (Entity type)	ENSG00000144674 - golgin A4

HPN

Gene (Entity type)

ENSG00000105707 - hepsin

CDC34

Gene (Entity type)

ENSG00000099804 - cell division cycle 34, ubiquitin conjugating enzyme

MGRN1

Gene (Entity type)

ENSG00000102858 - mahogunin ring finger 1

SMURF1

Gene (Entity type)

ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1

U2AF2

Gene (Entity type)

ENSG00000063244 - U2 small nuclear RNA auxiliary factor 2

NECTIN2

Gene (Entity type)

ENSG00000130202 - nectin cell adhesion molecule 2

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

GGA1

Gene (Entity type)

ENSG00000100083 - golgi associated, gamma adaptin ear containing, ARF binding protein 1

PNPLA2

Gene (Entity type)

ENSG00000177666 - patatin like domain 2, triacylglycerol lipase

GOLGA4

Gene (Entity type)

ENSG00000144674 - golgin A4

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.