CFP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CFP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CFP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CFP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CFP Up.

Results found

Linked to

	Label	Description
	SMURF1 Gene (Entity type)	ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1
	GOLGA4 Gene (Entity type)	ENSG00000144674 - golgin A4
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f
	GNB2 Gene (Entity type)	ENSG00000172354 - G protein subunit beta 2
	NAPA Gene (Entity type)	ENSG00000105402 - NSF attachment protein alpha
	POLR2J2 Gene (Entity type)	ENSG00000228049 - RNA polymerase II subunit J2
	CHRNA1 Gene (Entity type)	ENSG00000138435 - cholinergic receptor nicotinic alpha 1 subunit
	CDC37 Gene (Entity type)	ENSG00000105401 - cell division cycle 37, HSP90 cochaperone
	LRRC31 Gene (Entity type)	ENSG00000114248 - leucine rich repeat containing 31
	DAPK3 Gene (Entity type)	ENSG00000167657 - death associated protein kinase 3

SMURF1

Gene (Entity type)

ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1

GOLGA4

Gene (Entity type)

ENSG00000144674 - golgin A4

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

GNB2

Gene (Entity type)

ENSG00000172354 - G protein subunit beta 2

NAPA

Gene (Entity type)

ENSG00000105402 - NSF attachment protein alpha

POLR2J2

Gene (Entity type)

ENSG00000228049 - RNA polymerase II subunit J2

CHRNA1

Gene (Entity type)

ENSG00000138435 - cholinergic receptor nicotinic alpha 1 subunit

CDC37

Gene (Entity type)

ENSG00000105401 - cell division cycle 37, HSP90 cochaperone

LRRC31

Gene (Entity type)

ENSG00000114248 - leucine rich repeat containing 31

DAPK3

Gene (Entity type)

ENSG00000167657 - death associated protein kinase 3

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.