SIRPA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SIRPA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SIRPA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SIRPA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SIRPA Up.

Results found

Linked to

	Label	Description
	RRP8 Gene (Entity type)	ENSG00000132275 - ribosomal RNA processing 8
	IL10RB Gene (Entity type)	ENSG00000243646 - interleukin 10 receptor subunit beta
	TRAF1 Gene (Entity type)	ENSG00000056558 - TNF receptor associated factor 1
	PSMA1 Gene (Entity type)	ENSG00000129084 - proteasome 20S subunit alpha 1
	MED28 Gene (Entity type)	ENSG00000118579 - mediator complex subunit 28
	ATP5MC3 Gene (Entity type)	ENSG00000154518 - ATP synthase membrane subunit c locus 3
	COX7A2L Gene (Entity type)	ENSG00000115944 - cytochrome c oxidase subunit 7A2 like
	MRS2 Gene (Entity type)	ENSG00000124532 - magnesium transporter MRS2
	COX7A2 Gene (Entity type)	ENSG00000112695 - cytochrome c oxidase subunit 7A2
	GABARAPL2 Gene (Entity type)	ENSG00000034713 - GABA type A receptor associated protein like 2

RRP8

Gene (Entity type)

ENSG00000132275 - ribosomal RNA processing 8

IL10RB

Gene (Entity type)

ENSG00000243646 - interleukin 10 receptor subunit beta

TRAF1

Gene (Entity type)

ENSG00000056558 - TNF receptor associated factor 1

PSMA1

Gene (Entity type)

ENSG00000129084 - proteasome 20S subunit alpha 1

MED28

Gene (Entity type)

ENSG00000118579 - mediator complex subunit 28

ATP5MC3

Gene (Entity type)

ENSG00000154518 - ATP synthase membrane subunit c locus 3

COX7A2L

Gene (Entity type)

ENSG00000115944 - cytochrome c oxidase subunit 7A2 like

MRS2

Gene (Entity type)

ENSG00000124532 - magnesium transporter MRS2

COX7A2

Gene (Entity type)

ENSG00000112695 - cytochrome c oxidase subunit 7A2

GABARAPL2

Gene (Entity type)

ENSG00000034713 - GABA type A receptor associated protein like 2

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.