CPE Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CPE Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CPE Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CPE Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CPE Down.

Results found

Linked to

	Label	Description
	PIK3CB Gene (Entity type)	ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
	ATP8B4 Gene (Entity type)	ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)
	CD37 Gene (Entity type)	ENSG00000104894 - CD37 molecule
	TRAPPC6A Gene (Entity type)	ENSG00000007255 - trafficking protein particle complex subunit 6A
	IFT20 Gene (Entity type)	ENSG00000109083 - intraflagellar transport 20
	PTRH2 Gene (Entity type)	ENSG00000141378 - peptidyl-tRNA hydrolase 2
	CPSF4 Gene (Entity type)	ENSG00000160917 - cleavage and polyadenylation specific factor 4
	BIN2 Gene (Entity type)	ENSG00000110934 - bridging integrator 2
	CCDC59 Gene (Entity type)	ENSG00000133773 - coiled-coil domain containing 59
	MRPS10 Gene (Entity type)	ENSG00000048544 - mitochondrial ribosomal protein S10

PIK3CB

Gene (Entity type)

ENSG00000051382 - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta

ATP8B4

Gene (Entity type)

ENSG00000104043 - ATPase phospholipid transporting 8B4 (putative)

CD37

Gene (Entity type)

ENSG00000104894 - CD37 molecule

TRAPPC6A

Gene (Entity type)

ENSG00000007255 - trafficking protein particle complex subunit 6A

IFT20

Gene (Entity type)

ENSG00000109083 - intraflagellar transport 20

PTRH2

Gene (Entity type)

ENSG00000141378 - peptidyl-tRNA hydrolase 2

CPSF4

Gene (Entity type)

ENSG00000160917 - cleavage and polyadenylation specific factor 4

BIN2

Gene (Entity type)

ENSG00000110934 - bridging integrator 2

CCDC59

Gene (Entity type)

ENSG00000133773 - coiled-coil domain containing 59

MRPS10

Gene (Entity type)

ENSG00000048544 - mitochondrial ribosomal protein S10

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.