PTGDR Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTGDR Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTGDR Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTGDR Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTGDR Up.

Results found

Linked to

	Label	Description
	SLC35A3 Gene (Entity type)	ENSG00000117620 - solute carrier family 35 member A3
	ABI1 Gene (Entity type)	ENSG00000136754 - abl interactor 1
	HPD Gene (Entity type)	ENSG00000158104 - 4-hydroxyphenylpyruvate dioxygenase
	ZFYVE16 Gene (Entity type)	ENSG00000039319 - zinc finger FYVE-type containing 16
	PSMA5 Gene (Entity type)	ENSG00000143106 - proteasome 20S subunit alpha 5
	CLTA Gene (Entity type)	ENSG00000122705 - clathrin light chain A
	SIM2 Gene (Entity type)	ENSG00000159263 - SIM bHLH transcription factor 2
	CFAP298 Gene (Entity type)	ENSG00000159079 - cilia and flagella associated protein 298
	PSPC1 Gene (Entity type)	ENSG00000121390 - paraspeckle component 1
	CTBS Gene (Entity type)	ENSG00000117151 - chitobiase

SLC35A3

Gene (Entity type)

ENSG00000117620 - solute carrier family 35 member A3

ABI1

Gene (Entity type)

ENSG00000136754 - abl interactor 1

HPD

Gene (Entity type)

ENSG00000158104 - 4-hydroxyphenylpyruvate dioxygenase

ZFYVE16

Gene (Entity type)

ENSG00000039319 - zinc finger FYVE-type containing 16

PSMA5

Gene (Entity type)

ENSG00000143106 - proteasome 20S subunit alpha 5

CLTA

Gene (Entity type)

ENSG00000122705 - clathrin light chain A

SIM2

Gene (Entity type)

ENSG00000159263 - SIM bHLH transcription factor 2

CFAP298

Gene (Entity type)

ENSG00000159079 - cilia and flagella associated protein 298

PSPC1

Gene (Entity type)

ENSG00000121390 - paraspeckle component 1

CTBS

Gene (Entity type)

ENSG00000117151 - chitobiase

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.